Without being able to examin you, yr history, and you present with possible patella femoral pain. Im thinking we are looking chondromalcia or patellar(knee cap) tracking issues. Since yr on cycle nsaids are generally out. But aggresive foam rolling and stetching should help. The Focus area for strength should be the VMO which is the big quad muscle that overhangs than knee on the inside. Also focus on foam rolling the outer part of your thigh IT Band. It can hurt like a bitch but it's very important for tracking issues. You roll out from your knee all the way up to your outer hip. I would start there.